Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANHKSAEKRIRQTIKRTERNRFYKTKVKNIIKAVREAVAINDVAKAQERLKIANKELHKFVSKGILKKNTASRKVSRLNASVKKIALA------------
1FJG Chain:T ((8-106))
--RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA
General information:
TITO was launched using:
RESULT:
Template:
1FJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -275 for 552 contacts (-0.5/contact) +
2D Compatibility (PS) -9599 + (NN) -5348 + (LL) 352
1D Compatibility (HY) 2000 + (ID) 1300
Total energy: -14170.0 ( -25.67 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_1FJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FJG-query.scw
PDB file :
Tito_Scwrl_1FJG.pdb
: