Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHAN--LSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
4DMI Chain:A ((4-176)) | ---------------QFRIDSESIRDKLNTLLPSQSRLSGSTTIIPVVDLTETAEGGAQREDLQKAFTLINTIDFDVENTTTTIANTPGFYKVVGNLS-------SRDEASGAIAVIEVTDGITTKILANNRIVSPDGTTAVQSVPVPFDLMVKL-------VAGDTLQARSNNAEVRVQGIARQIADVSGNLINP------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38317 for 1021 contacts (37.5/contact) +
2D Compatibility (PS) -16869 + (NN) -1438 + (LL) 5788
1D Compatibility (HY) 1200 + (ID) 1000
Total energy: 25998.0 ( 25.46 by residue)
QMean score : -0.067
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