Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKRVPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 3RV1 Chain:A ((15-256)) | ------------SNELKVREFYRLHNACVKLKESIKLIYENPLVTDQNVLNLG------TAENTIDYTILNTPTLNVAKTLLGNRYSLDLIDLFQSHDFKDSNTDVDMFIKY---PVVYD--ENLENLAFMHKSQLSN-----ERLEFLGDSWLGALVSYIVYTRFPSAN------------EGMLSQMKESIVNNNNLFDWSTKLNFTKRLQGNIA-------------------------KRYADCVQAYIGALVIDRFGTEFLDIKEWLEELSEKKLAK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22237 for 1297 contacts (-17.1/contact) +
2D Compatibility (PS) -23279 + (NN) -15747 + (LL) 6084
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -60729.0 ( -46.82 by residue)
QMean score : 0.159
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