Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALNERLFVQ-ELYHGPSLAFKDMALQPLAS-LFSNLA-VGK-------------------NEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGA-INSKEKITLAIPSGNFGNALGAFYAKK--MGLNIAKIKVVTNSN-DVLREFIETGRYDLTKR----SLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH------------------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 3SS7 Chain:X ((101-439)) | --------------------------------------------------------------------------------------------GQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIM-SARIGFKVTVHMSAD-ARAWKKAKLRSH-GV--TVVEYEQDYGVAVEEGRKAAQSD--PNC-----FFIDD--ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHV-HCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGF--VGRAMER-------------L---------------LDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110248 for 2643 contacts (-41.7/contact) +
2D Compatibility (PS) -31667 + (NN) -12952 + (LL) 14104
1D Compatibility (HY) 1600 + (ID) 1900
Total energy: -141063.0 ( -53.37 by residue)
QMean score : 0.315
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