Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRIKVGSDLNKKESLLDAFVKTYLQTLEPISSKRLKELANLKVSCATIRNYFQILSKEGMLHQAHSSGARLPTFKAFENYWHKSLRFEVLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCAVGYSVKMEKFLLELVGRSVKEVRLIAASVNALSLARQLERLEYSSAQITRFNLMGLKTLLNSPLFFDILEGKVLERFKKGLHFIEPDCMLVTRPIEFQNERMQLLCVGKLECDYEGFFQTISKEE |
| 3R4K Chain:A ((5-106)) | ----------VSKALTLLTYFN----HGRLEIGLSDLTRL--SGMNKATVYRLMSELQEAGFVEQVEGARSYRLGPQVLRLAALREASVPILSASRRVLRELSEDTGETTHLSLLQGEQLASLSHAYSSRNATKVMMEDAEVLTFHGTASGLAVLAYSEPSFVDAVLAAPLTARTPQTQTDPAAIRAEIAEVRRTGLAQSIGGFEAEVHSHAVPIFGPDRAVLGALAVAAPTSRMTPDQKRTIPPALRAAGLSLTERIGGACPPEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23870 for 573 contacts (-41.7/contact) +
2D Compatibility (PS) -10528 + (NN) 62 + (LL) 1180
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -35756.0 ( -62.40 by residue)
QMean score : 0.511
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