Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQGG-A----KQKIIELLENVDA------TE---IDVLKIRSK------QIRELIFGTPFPSDLRDEI----------FQAYEILSQQYH------------------MKEADVAVRSSATAEDLPD--ASFAGQQDTYLNI-----KGKTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADK---GSAGVMFSIDTETGFKDAVFITSAWGLGENVVGGTINPDEFYVFKPTLEQNKRPIIKRQLGNKTQKMVYAPRGSEHPTRNIKTTKKEWQSFSLSDEDVLILAKYAIEIEKHYSKEAKQYRPMDIEWAKDGESGEIFIVQARPETVQSQKTKEENQV---------------------F---EKFKFK-NPNEKKEIILQGRAIGSKIGSGKVRIINDLEHM-NSFKEGEILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVSGAT------------DSLYTGMEITVSCAEGEEGYVYAGIYEHEIERVE-------LSNMQETQTKIYINIGNPEKAFSFSQLPNHGVGLARMEMIILNQIKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVKKIAEGIGMISAAFYPKPVIVRTSDFKSNEYMRMLGGS-----------------S-YEPNEENPMLGYRGASRYYSESYNEAFSWECEALALVREE----MGL-TNMKVMIPFLRTIEEGKKVLEILRKNNLE-----SGKNGLEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDRDSEL--VSHVF-------DE----RNEAMLKMFKKAIEACK--RHNKYCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHGLTAR |
| 1KBL Chain:A ((1-872)) | AKWVYKFEEGNASMRNLLGGKGCNLAEMTI----LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPG-DWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLEN----------------------------------------------DMPDCYKQFMDLAMKLEKHFR------DMQDMEFTIE--EGKLYFLQTRNGKRTAPAAL-QIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAEGDYI---SLDGSTGKIYKGDIETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIGLCRTEHMFFEA-DRIM-KIRKMILSDSV----------EAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHTEEEQAELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTY--PEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGG-DPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAALNN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257851 for 6281 contacts (-41.1/contact) +
2D Compatibility (PS) -77258 + (NN) -22277 + (LL) 5660
1D Compatibility (HY) -22400 + (ID) 8900
Total energy: -383026.0 ( -60.98 by residue)
QMean score : 0.338
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