Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------MSRNEVLLNGDINFKEVRCVGDNGEVYG---IISSKEALKIAQNLG--LDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKE---IKLSTQIAQNDINYKVKHAREFIES--NKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEA-PKNEKKTKENNPPFNRINLMKGENHAKNED---------------------------------------------------------------------------------------------------------------------------- |
| 3M6W Chain:A ((4-460)) | LPKAFLSRMAELLGEEFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRISPWPLRPIPWCQEGFYYPEEARPGPHPFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHRLEGEGHFLARFRKEGGAWSTPRLERPSPLSQEALRAFRGFLEEAGLTLEGPVLDRAGHLYLLPEGLPTLLGLKAPAPGLYLGKVQKGRFLPARALALAFGATLPWPEGLPRLALTPEDPRALAFATGEGVAWEGEDHPLALVVLKTAAGEFPLDFGKAKRGVLRPVGVGLRSHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 85374 for 1351 contacts (63.2/contact) +
2D Compatibility (PS) -20900 + (NN) 4554 + (LL) 0
1D Compatibility (HY) 14400 + (ID) 650
Total energy: 82778.0 ( 61.27 by residue)
QMean score : 0.066
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