Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MVVTIERMESRINRLSAKIDALLEQQKKVISLLET---------YLSVYSTPQEASNKLF--KGISQGMELAPEIAQEDEEKRLYVLQYLS--HVDITKNKQDSQLKKD------CLEFIQRFNIPKP------IIVTALYNLKGIKPTK----KEVAKQLQKLYVWERR----YQQGGIDALKDRRGRPLKKP |
| 1AVP Chain:A ((1-204)) | MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRLKQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNSPQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11090 for 1133 contacts (9.8/contact) +
2D Compatibility (PS) -17183 + (NN) -11364 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -23257.0 ( -20.53 by residue)
QMean score : 0.188
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