Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWVLKGV--YFD-----ECLKKGKNHIITTVAEHPAVRSTCNFL-ESLGVEVTYLPINE-HGSITADQVKEAITEKTALVSVMWANNETGLIFPIEEIG----AICKEK------GVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVG----LTPLFHGGEHMNGRRSGTLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRVH---------RVPNTTLISVRG--IEGEAMLWDLNRSNIAASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
| 3GZD Chain:B ((26-438)) | ---KVYMDYNATTPLEPEVIQAMTKAMWEAWGNPSSPYSAGRKAKDIINAARESLAKMIGGKP-QDIIFTSGGTESNNLVIHSVVKHFHANQTS----GAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFYGPR-IGALYIR-GLGEFTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERL----EAEFGQKRIHLNSQFPGTQRLPNTCNFSIRGPRLQGHVVLAQCRV--LMASVG--------QPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQLED----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194582 for 3132 contacts (-62.1/contact) +
2D Compatibility (PS) -38474 + (NN) -12874 + (LL) 1808
1D Compatibility (HY) -23200 + (ID) 7050
Total energy: -274372.0 ( -87.60 by residue)
QMean score : 0.474
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