Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------MALNLEKKQEIIKAFATKANDTGSCEVQVALLNERIKLLTEHLKTNPKDHSSRLGLLKLVAQRRNLLKYIKRTDHVRYVVLIEKLGIKDR------------------------------------------------------------------- |
3J6V Chain:O ((54-256)) | TQKPVQQSQEDDPPPSMLLKDYQNVPGIEKVDDVVKRLISLEMANKKEMLKIKKEQLMSKVVENPKDTSSLEAQIVALTVKIRSYEEHMQKHQKDKAHKRYLLMSIDKRQKMLKNLRKTNYPVFEKTCKELGIEYTFPPPYHRKIHRRLATKKALCIRVFQEVQKLKKQKRALKTAAAAAQKQGQRNPESPSEARSEAIKETQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16468 for 548 contacts (-30.1/contact) +
2D Compatibility (PS) -10022 + (NN) -11282 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -42072.0 ( -76.77 by residue)
QMean score : 0.606
|
|
|