Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINNNNNNKKLRGFFLKVLLSLVVFSSYGSANDDKEAKKEALEKEKNTPNGLVYTNLDFDS--FKATIKNLKDKKVTFKEVNPDI--IKDEVFDFVIVNRVLKKIKDLKHYDPVIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLHGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL |
3L8D Chain:A ((75-148)) | --------------------------------------------------GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKRGVNEKMLGQLSTDLQQSLTFLWVFMLKRHK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13730 for 382 contacts (-35.9/contact) +
2D Compatibility (PS) -7510 + (NN) -2083 + (LL) 2716
1D Compatibility (HY) 0 + (ID) 400
Total energy: -21007.0 ( -54.99 by residue)
QMean score : 0.416
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