Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKATQSTINDFFALTGTIFSIPVYQRNYTWEEENCEKLLQDIVNISQNKKTHFMGSITYILHLIDDEKSLRQLQEFVIIDGQQRITTIMLLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIYGAFLWLKIVAIGLELGEDDPQVVFESINATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFEDRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLDRDHYFLHRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEEGKLDYENFHEILQILISYFVRRSVCGDSTPTLTRVLYSLYRQLGEDVSADALKRYLGKSVGQMAFPNDDKIKAAFLVRNAYAANQVCKFILLEIEKLSNAEPPKEENLEVEHFYPKTPTQEWRDRVGDYFTFEQDYLNNFGNLTLSGQNQRLGNKSYEAKIALMEEYSSLHLNDYFTNNTDSWGIEEVRARSEYLADQFCQVGLFKDLPKEYRARELHKTLDDNLTNHNLQSVKLPNDQRRMAGNAKELASVVIDYLLENAREAFESYTDD--ES-QKYIYWSKAKAEARDRDGTLVVPFEKYGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE |
| 3FMT Chain:A ((60-154)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEYAEQKRAVNR-----FMLLLSTLYSLDAQAFAEATESLHGRTRVYFAADEQTLLKNGNQ-TKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34872 for 605 contacts (-57.6/contact) +
2D Compatibility (PS) -9882 + (NN) -4785 + (LL) 41448
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -12141.0 ( -20.07 by residue)
QMean score : 0.425
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