Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYYKNSGNIHMYHQDNTILKDKTRFCFETFG--FLVEAEVEEFELKDAILRLAWRGWNEAKGDEYLEVYHAWLVEKLDNDRVRILTQESQ--SGVPAKALAKSVPNAMLNGHQAWLDGLVAYSR |
2NS9 Chain:A ((11-155)) | -----------------LKVRYEGSF-EVSKTPEEVFEFLTDPKRFSRAFPGFKSVEV-E--DGSFTIELRLSLGPLRGDARVRASFEDLEK---PSKATVKGSGRGA-GSTLDFTLRFAVEPSG-GGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33919 for 1027 contacts (-33.0/contact) +
2D Compatibility (PS) -14780 + (NN) -9 + (LL) 1404
1D Compatibility (HY) -800 + (ID) 800
Total energy: -48904.0 ( -47.62 by residue)
QMean score : 0.337
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