Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSH------H------TPMNTPLKLSVQALERYFLGQLFEFDAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
1SFE Chain:A ((12-176))
LAVRYALADCELG----RCLVAESERGICAILLGDDDATLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN-----------
General information:
TITO was launched using:
RESULT:
Template:
1SFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77440 for 1141 contacts (-67.9/contact) +
2D Compatibility (PS) -16527 + (NN) -7075 + (LL) 1184
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -109758.0 ( -96.19 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1SFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFE-query.scw
PDB file :
Tito_Scwrl_1SFE.pdb
: