Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPNKQEFLDFKQKYLDFSRTKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIENEVYLNEINPIPGSLANYLF--------DDFKTTLENLAQ-SLPKTPKIQVKNSYLLQIQKNK |
3R5X Chain:A ((4-304)) | MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKM------------------------D----------L-IEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLETVFEWDSEVVIEKYIKG-EEITCSIFDGK-QLPIISIRH--AAEFFDYNAKYDDAST-IEEVIELPAELKERVNKASLACYKALKCSVYARVDMMVKDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSLRVRKEEG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152422 for 2249 contacts (-67.8/contact) +
2D Compatibility (PS) -31477 + (NN) -11939 + (LL) 3852
1D Compatibility (HY) -18800 + (ID) 3750
Total energy: -214536.0 ( -95.39 by residue)
QMean score : 0.401
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