Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGLFVAPVLAILGAISADEMEKKRDDAKAYYSQVEVAV-KKADVVIDNLQAVKKMADLFT-----------------RQITKFDALFFLLS--QDAIATMKKHHYDTSRYNQKEKDQLCVTVSTLFSLSAFLKAPIMDKHQKLNKKAQKALNLMRDQMDSL-----------ENGNYSLDGIRFRQAQLKDLRDDKTS
1E20 Chain:A ((18-202))
---RKPRVLLAASGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSLHFLDKLSLPQEV-TLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCD---------NLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFWESQAH
General information:
TITO was launched using:
RESULT:
Template:
1E20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57509 for 1212 contacts (-47.4/contact) +
2D Compatibility (PS) -16800 + (NN) -3721 + (LL) 744
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -85136.0 ( -70.24 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_1E20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E20-query.scw
PDB file :
Tito_Scwrl_1E20.pdb
: