Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEALNALNQLNALHSKNAAHHFNATLPILLKVLEKQDKDLFLLQVGNRIIPTKSEQELKINQPYFAIMQRNQLGDIVLKNLVPAPKILDALDDLPVIEMKKLKEILSAKDNTPLKEYKELLSEKLIHAKSSQEFLNTANMLLSLQSQVLSFVVENERKKAFLQMKAKKQSVDFYALYPNLGEIGGVIYLKEKEKQLFLKTTLQRTKEVLKEAQNTLLGF-SFVEIVCEKTPMLFAFEDRLLDTLG |
1OTC Chain:A ((329-495)) | SLNAVVL--------TEVDKKHAALPSTSLQDLFHHADSD----------------------------------------KELQAQDTFRTQFYVTKIEPSDVKEWVKGYDRKTKKSS------------SLKGASGKGDNIFQVQFLVKDASTQLNNNTYRVLLYTQDGL--------------GANFFNVKADNLHKN---ADARKKLEDSAELLTKFNSYVDAVVERRNGFYLIKDTKLIY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14235 for 1228 contacts (-11.6/contact) +
2D Compatibility (PS) -16161 + (NN) 9519 + (LL) 6376
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -17101.0 ( -13.93 by residue)
QMean score : 0.108
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