Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------MCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVCGVLSLQARLSFENCSKPLDCSLFATTCTPQNPIGSCMVSSQGGVRGVLSLQARLSFKNCFLVKSLKPSQLTLMLTGFLGGFSFLTTGFW---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4Q6O Chain:A ((21-437)) | MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLL-------HPIEEYHLKNTRTAQGDTEMQKALTFYAINQKK--SAFANEASKELPLASRVFYHLQAIEGLLN-QLNIPFKRDF---DLNPNSVHALIN---------DKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25057 for 692 contacts (-36.2/contact) +
2D Compatibility (PS) -11672 + (NN) -300 + (LL) 1128
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -40251.0 ( -58.17 by residue)
QMean score : 0.093
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