Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQRKESLQNNPNLSKKDIKIVEKILSKNDIKAAEMKERYLKEGLYVLNFMSSPGSGKTTMLENLADFKDFKFCVVEGDLQTNRDADRLRKKGVSAHQITTGEACHLEASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCP-------SSYNL-GAAMNIVLLSVPEGDDKVLK-YPTM---FMCADAVIISKADMIEVFNFRVSQVKEDMQKLK---PEAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF |
| 1MKY Chain:A ((178-356)) | -------------------------------------------TDAIKVAIVGRPNVGKSTLFNAILNK---ERALVSPIP------VDDE-------------------------V-------FIDGRKYVFVDTAGL----EKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAYASYTTKVPSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78868 for 1153 contacts (-68.4/contact) +
2D Compatibility (PS) -16026 + (NN) -8433 + (LL) 5976
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -104151.0 ( -90.33 by residue)
QMean score : 0.559
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