Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKHKSEKQEVLKKEMLELEKLALELENLVENEVKNIKETQQIIFKKKEELVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRL-NDKIYAEVLTSGDMITCPYCGRILYAESTHESNAQPPKESQPKESQEESQEESQEESQESV |
2JRR Chain:A ((17-56)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACDGGEGALGHPRVWLQIPEDTGWVECPYCDCKYVLKGSKADALEHHHHHH-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18605 for 183 contacts (-101.7/contact) +
2D Compatibility (PS) -4199 + (NN) -737 + (LL) 18456
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -8285.0 ( -45.27 by residue)
QMean score : 0.170
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