Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFQENLAALDLEYLWHPCSQMQEHQNFPIIPIKKAQGIYLYDFNDNAYMDLISSWWVNLFGHNNAYISQQLKNQIDNLEHVLLASFSHKPIITLSQRLCQLTG--MDKCFYADNGSSCIEIALKMSYHAHFLKNQTRRKKLFLSLSNSYHGETLGALSVGDV-----KLYKDTYTPLLLKNLITPVPKN--DSEI-ENSLNALKRLLDKHGEEICAFIAEPLLQCAGNMHIYSAKYLKQAVLWCKQKNIHIIFDEIATGFGRTGSMFAYEQCGIKPDFLCLSKGISGGYLPLSALLTHNEIYNQFYAPYEENKAFLHSHSYTGNALACACANATLDIFEKENVIEKNKALSEFIFSALQNALKPLIERQVVSDLRHLGMVFAFEVFLQTKERLSLAVFKK-ALKKGLLLRPLNNTIYLMPPYIITHEEIKKAIAGLVEAIDELKKAENK |
| 1S06 Chain:B ((7-423)) | --------AFDQRHILHPYTSMTS--PLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQR--FLTFRNGYHGDTFGAMSVCDPDNSMHSLWKG-YLP---ENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGKTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETIS--NGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIE----VQLREQLAPARDAEMVADVRVLGAIGVVE----TTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFC-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306247 for 3463 contacts (-88.4/contact) +
2D Compatibility (PS) -43600 + (NN) -12822 + (LL) 3144
1D Compatibility (HY) -36000 + (ID) 7550
Total energy: -403075.0 ( -116.39 by residue)
QMean score : 0.493
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