Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTIDFTFCEINPKKGFGGANGNKISLFYNNELYMVKFPPKPSTHKEMSYTNGCFSEYVACHIVNSLGLKV-QETLLGTYKNKIVVACKDFTTHQYELVDFLSLK-NTMIELEKSGKDTNLNDVLYAIDNQHFIEPKVLKCFFWDMFVADTLLGNFDRHNGNWGFLRASNSKEYQIAPIFDCGSCLYPQADDVVCQKVLSNIDELNARIYNFPQSILKDDNDKKINY-YDFLTQTNNKDCLDALLRIYPRIDMNKIHSIIDNTPFMSEIHKEFLHTMLDERKSKIIDVAHTRAIELSLQHKQAHSNPYDNAD---DLDNSNEYTPTPKRRR- |
| 4LXU Chain:A ((1-273)) | -------------------GHMIKICIAGKNNIAVNSLQFILKNYFE-------ADQIVVIPNKNDKGIDSWQKSLLKFALDNNIKIVTLDEIYNIEQIIFFSLEFDQIIKIENFK-----SDRLFNI---HFSALP----KYKGVFTSITPILN-NELESGVTLHRIDNG--------IDTGNIIDQHCFPI---DINDTARDLYFNYLKYGESIFKKNIQTIINNSYKDLKQTNINS------SYFSRKDINLVHKI-NFKKTSFEIHNQIRAFIFQEYQLPIIN--NSKIIKSILANEFIGYNVFEEFENYFIISGIDGFKIIAQKLNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48127 for 2102 contacts (-22.9/contact) +
2D Compatibility (PS) -26899 + (NN) 4569 + (LL) 3652
1D Compatibility (HY) -11600 + (ID) 2650
Total energy: -81055.0 ( -38.56 by residue)
QMean score : 0.187
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