Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILK-KGVSYFDWGASGLASALVEKRVKSLLPYY-ANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHSNEVSWR----EGLCEVVRIPLN-EHGLLDLEILEQTLKKTPNSLVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAHANPKDC--EYQTGFYAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECG--------------LDFIHKKENNLLRVLVYGLKDLPAINIYGNLTASRVGVVAFNIGGISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 3CAI Chain:A ((4-397)) | ------------------DVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVG-AHPSARRSAAVLDAAREAVADLVNAD-PGGVVLGAD-RAVLLSLLAEASSSRAG--------------LGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-KSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGP-P-IGAMVFRDPSVMNSF-GSVS-TN-----------PYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRP-EAQIPVVSFAVHKVPADRVVQRLAD-NGILAIANTGSRV---LDVLGVN--------DVGGAVTVGLAHYSTMAEVDQLVRALASLG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231527 for 3274 contacts (-70.7/contact) +
2D Compatibility (PS) -40132 + (NN) -17758 + (LL) 3652
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -299115.0 ( -91.36 by residue)
QMean score : 0.425
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