Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLENVKKSLFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKEN--SGCFNLGVLYYQGHGVEKNLKKAASFYSKACD--LNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD--LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGD--GCTILGSLYDAGRGTPKDLKKALASYDKACDLKD--SPGCFNAGNMYHHGEGAAKNFKEALARYSKACELE---------NGGGCFNLGAMQYNGEGATRNEKQAIENFKKGCKLGAKGACDILKQLKIKV |
| 2XPI Chain:A ((301-550)) | ------------------------LEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHE----SGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLC----VNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAI----EGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQL----GNILLANEYLQSSYALFQYDPLLLNELGVVAFN----KSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYR----KLKMYDAAIDALNQGLLLSTNDANVHTAIALVYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42869 for 1793 contacts (-23.9/contact) +
2D Compatibility (PS) -23998 + (NN) -6786 + (LL) 1688
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -80815.0 ( -45.07 by residue)
QMean score : 0.366
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