Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSIRRGDGLNVVPFIDIMLVLLAIVLSISTFIAQGKIKVSLPNAKNAEKSQPNDQKVVVISVDEHDNIFVDDKPTNLEALSAVVKQTDPKTLIDLKSDKSSRFETFISIMDILKEHNHENFSISTQAQ
2NOC Chain:A ((1-99))
MKTGYKV------------------MLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTGEMS-----PLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKKLEHHHHHH-------
General information:
TITO was launched using:
RESULT:
Template:
2NOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3990 for 569 contacts (-7.0/contact) +
2D Compatibility (PS) -10894 + (NN) -6275 + (LL) 2792
1D Compatibility (HY) 0 + (ID) 700
Total energy: -19067.0 ( -33.51 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_2NOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NOC-query.scw
PDB file :
Tito_Scwrl_2NOC.pdb
: