Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQG-III--------NEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRA-IRPM--------KDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLGGLV-----ISKSIRVAGDKLDQSIVEYIRKKFNLLI-------------GERTGEEIKIEIGCAIKLDPPLTMEVSG--RDQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
2V7Y Chain:A ((2-351)) | ----------SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNG--------ERLVGEVAKRQAITNPNTIISIKRHMGTDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQ----ISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGL--TPADID-KVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161832 for 2583 contacts (-62.7/contact) +
2D Compatibility (PS) -33533 + (NN) -10440 + (LL) 1492
1D Compatibility (HY) -4400 + (ID) 4100
Total energy: -212813.0 ( -82.39 by residue)
QMean score : 0.448
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