Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAGIIGLGLMGGSLGLALQEWGRFKSVIGYDHNALHAKLALTLGLVDEC---VEFEK-ILECDVIFLAIPVEGIIECLKKMTP-IKKSATIIDLGGAKAQILHNIPKSI-RQNFIAAHPMCGTEFYGPKASVKGLYENALVILCDLEDSGT--------EQVEIAKEIFLGIKARLIKMKSNEHDTHVAYISHLPHVLSYALANSVLKQNDPEMILSLAGGGFRDMSRLSKSSPLMWKDIFKQNRDNVLEAIEKCEKEIAQAKAWIENNDYESLAEWMAQANKLQEFM |
| 3KTD Chain:A ((9-290)) | RPVCILGLGLIGGSLLRDLHAAN--HSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTHA-PNNGFTDVVSVKTAVYDAVKARNMQHRYVGSHPMAGTA-SGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDN--GGALSLSLAAGSYRDSTRVAGTDPGLVRAMCESNAGPLVKALDEALAILHEAREGLTAEQ-PNIEQLADNGYRSRIRY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124864 for 2080 contacts (-60.0/contact) +
2D Compatibility (PS) -29070 + (NN) -14692 + (LL) 560
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -182766.0 ( -87.87 by residue)
QMean score : 0.435
|
|
|