Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNNQNNENHENSSENSKDHHEARAGAFERFTNRKKRFRENAQKNAESSNHETLSHHKKEHRPNKKPNNHHKPKHASQKTRNYAKEELDNNKVEGVTEILHVNERGTLGFHKELKKGVEANNKIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFPKEGLF--GV-DILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKE--LQFPLYGTPLSLGLIGSKFDEHGLKK------------Y-----RSYFKIVEKRCPISVG-EFIIEWIHITHSIIDSSALAIQTK--AGTIIHTGDFKIDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKE---AQGRVIMSTFSSNIHRVHQAIQYGIKYNR------KIAVIGRSMEKNLDIAREL-GYIHLP-----------Y---QSFIEA------NEVAKYPDNEVLIVTTGS--QGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASVS-AVLNFLIKKE----AKVAYQE--FDN-IHVSGHAAQEEQKLMLRLIK--PKFFLPVHGEYNHVARHKQTA-IACGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEVASAGVFAATIFVNKNKQALLESSQFSSLGLVGFKDEKHLIKEIQGGLEVLLKSSNAEILNNPKKLEDHTRNFIRKALFKKFRKYPAIICHAHSF |
| 3AF5 Chain:A ((140-650)) | --------------------------------------------------------------------------------PKVVRTPPLQSQTIYSIRQILQTESKDRRKFLR------QVGRNIYRKPEYK--------SRWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVL-REGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHT-ITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPAN--A-----KFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGM-IWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQL--------APDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFGI---STRAPNNLDTIRLR---------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174602 for 3867 contacts (-45.2/contact) +
2D Compatibility (PS) -47144 + (NN) -10868 + (LL) 13876
1D Compatibility (HY) -17200 + (ID) 4000
Total energy: -239938.0 ( -62.05 by residue)
QMean score : 0.381
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