Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCGIVGYIGDSEKKSILLEGLKELEYRGYDSAGLAVLSA-NRLEVFKTQGKLENLRTELKNKEFLNFGVSIAHTRWATHGKPSSANAHPHFTENLALVHNGIIENYASLKKELENKGHAFLSQTDTEVIAHLLEETLKSEGDLLKAFEKSISLLKGSYAILMLHKRAKESLFYAKSSSPLIVGKGKEGVFFASSLSVLAPKVDQFVILEENSVGQISLE--NFKDLNNIENMKDYAFENKDY---SKGNFRNYLEKEIYEQHSSLLECLEGRLEALSV-YCEIDP---EFLENVSEITLCSCGSSYHASLASVYLFERLAKIRARAILASEYRYAHFKSNPNELFIAISQSGETADTLEALKLAKAQG-LKTISLCNAPFSMMSRISDHTLLIRAGVERSVASTKAFSSQVMLLWLLSVYLGKQLG-TISKEEERIQAKNMLNSVKAMKVEPKLHE--KIKRLSKRYLHGHGFFYIGRDVFYPLALEGALKLKEISYLHAEGYASAEMKHGPIALVDSNLFTIALLSKHLLFDKTKSNIEELSARDSTICVLSSEILE-IADD---FIQLEESESYMEEFFRMNLAMQLLALEIAMRLNHDVDHPRNLAKSVTVE |
| 3OOJ Chain:B ((1-608)) | -AGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQML-AQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPS----RIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIF-YTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -307944 for 5340 contacts (-57.7/contact) +
2D Compatibility (PS) -63257 + (NN) -25557 + (LL) 1016
1D Compatibility (HY) -45600 + (ID) 12750
Total energy: -454092.0 ( -85.04 by residue)
QMean score : 0.490
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