Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLG-SFAEVPAMFNTWDRVVGISD-YAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGN-PKAVEHAKKFGISFLSFQEKTIVEVMEDIDAQAKALEV--DASKKLAKMQETLDFIKERLKNVKKKKGVEL-FH-KANKISGHQALDSDILEKGGIDNFGLKYV-KFGRADISVEKIVKENPEIIFIWWISPL-------SPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 3TNY Chain:A ((17-276)) | -------------------------------EVVTVEHAMGKTEVPANPKRVVILTNEGTEALLELGVK--PVGAVKSWTGD-PWYPHIKDKMKDVKVVGD--EGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIA-PTVFSET-LRGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAERNVSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNGKAYKVDDVIWNTAGGVIAANLLLDDIEKRFV------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71689 for 1902 contacts (-37.7/contact) +
2D Compatibility (PS) -26173 + (NN) -10051 + (LL) 5256
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -114907.0 ( -60.41 by residue)
QMean score : 0.434
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