Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWIPHYENPVSWPVG-GELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNG-SCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVP-TFSVGWTGTPVSTGK-LVSQI-------HAFKQE-------------DSKNYQHFLT---RNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGG-AGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 2CZ9 Chain:A ((1-327)) | ------MIKVKSPGRVNLIGEHTDYT-YGYVMPMAINLYTKIEAEKHG--EVILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKES----DYEVGGIKGRVSGNLPL----GAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHT--------------------LDYEYIPFPKDVSILVFYTGVR----SSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYE-----VSCKELDFFVERALKLGAYGARLTGAGFGGSAIALVDKED-AETIGEEILR----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132669 for 2479 contacts (-53.5/contact) +
2D Compatibility (PS) -32393 + (NN) -18211 + (LL) 4376
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -191947.0 ( -77.43 by residue)
QMean score : 0.445
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