Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPTMMTYINEEEEMCRAILANFQT-------NAE-KLESLVKNGAKEWLILATGSSLNAAQSAKYYIENIADVRITVEEPFNHLYYEKLSNHLDLVIGISQSGQSTSTISALERVKKEASV-PVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLMLTGLHFAYKTAQIDETKFNNEINAFSRATNAIPATIAETEAFYERWQEEFATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETESAVTERLVALRNYESKYTPFTYTVKFGTA-----GNDRTLLIPADLDEYQAPFLMILPFQILAHHIAELKGNKLTERIYTDFGVAMKSKTKPGDYA |
| 1MOQ Chain:A ((8-362)) | YRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLS-KVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSK-ELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLD-ASIEHDIVHGLQALPSRIEQMLSQ-DKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHV-EEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MOQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167084 for 3112 contacts (-53.7/contact) +
2D Compatibility (PS) -36014 + (NN) -12141 + (LL) 704
1D Compatibility (HY) -11600 + (ID) 3350
Total energy: -229485.0 ( -73.74 by residue)
QMean score : 0.400
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