Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MGNVKIDAAKVAEAKKSAA--IVEKSLESTHKKCKSVISYVEG------ASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALT--------ALEDYVEDFENTSYSKDVKRL-
2AO9 Chain:A ((13-132))
MMAKLDELKQKLTAKQIQAAYLLVENELMEEEKRTQDEMANELGINRTTLWEWRTKNQDFIAFKSEVADSFLAEKREQVYSKLMQLILGPQPSVKAMQLYMQRFGLLTDKKVIEGDL
General information:
TITO was launched using:
RESULT:
Template:
2AO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13350 for 509 contacts (26.2/contact) +
2D Compatibility (PS) -10540 + (NN) -3709 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -4249.0 ( -8.35 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2AO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AO9-query.scw
PDB file :
Tito_Scwrl_2AO9.pdb
: