Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQ--ALSDPIRLDIFLCLLKSKEKRFSGTT--YNISKSTMSHHIKLLKEAKLINLRKE---GTTHIYSVNQELVSLISHFFEECGEKDE
1UB9 Chain:A ((4-90))
-----------LKEIMKSHILGNPVRLGIMIFLLPRRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLSS------
General information:
TITO was launched using:
RESULT:
Template:
1UB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58323 for 517 contacts (-112.8/contact) +
2D Compatibility (PS) -7998 + (NN) 877 + (LL) 724
1D Compatibility (HY) -8400 + (ID) 850
Total energy: -73970.0 ( -143.08 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1UB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UB9-query.scw
PDB file :
Tito_Scwrl_1UB9.pdb
: