Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYK-NINQAPIVKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLS-KKPITISSHENLLDQVDSFQTGNGLLTR
3E6C Chain:C ((30-229))
-------------QMGLIRDFAKGSAVI---MPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTG---N----NIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVG-DTYEITMPLSQKSIGEITGVHHVTVSRVLASLKRENILDKKKNKIIVYNLGELKHLSEQT---------
General information:
TITO was launched using:
RESULT:
Template:
3E6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113536 for 1336 contacts (-85.0/contact) +
2D Compatibility (PS) -21259 + (NN) -5228 + (LL) 1796
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -147627.0 ( -110.50 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_3E6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E6C-query.scw
PDB file :
Tito_Scwrl_3E6C.pdb
: