Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMIDQEEEESQTAWKEKYRFAIHHYTNETDLAGVEKIDTLIQTGFTLPEGYKLIAVRHYGKQNLVKENTLIHAKTSFEVS-ICRELKVKI-
1EFN Chain:B ((18-150))
-------RPQVPLRPM-TYKAAVDLSHFLKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDWQNYTPGPG------------VRYPLTFGWCYKLVP-------VREVLEWRFDSRLAFHHVARELHPEYF
General information:
TITO was launched using:
RESULT:
Template:
1EFN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5243 for 684 contacts (-7.7/contact) +
2D Compatibility (PS) -10351 + (NN) 2810 + (LL) 2324
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -15360.0 ( -22.46 by residue)
QMean score : 0.160
(partial model without unconserved sides chains):
PDB file :
Tito_1EFN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EFN-query.scw
PDB file :
Tito_Scwrl_1EFN.pdb
: