Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------MADSKSFTFELNESVLTA--------QVGRLDEMAMVVEQRFSE------------------LKMTIEDVGNADPGSKISESLGGLQSGLGTISSAFGQLGSSSEAI---TSGFGTAVGSVGGITDAFKNLGSSVQNGTLFSSLATGIGGMSTMLGGVSGGVQGITNLASGFM-------ELKNHLGGLMSSIGGVG--GIMGKLTSPMGLVIIGIVA-------LVAAFAYLMTTNESFRNTVMSVVTQVAQLFGQLVA---SLMPIIMQIVTAVMQIG----AALMPMVMQFISFFAQLLAQLMPF-------------INMLISMLMPVIMQIVQVVMSLVSALLP---------------SIMTVIQGIMSVIQFLIPI-IMQIATVVVQIVVTIIS---YISKIMPIVMTIIG-------------VIVSIITTIISYVV---------IIATTIASVIGKIISFIASVITAVIGIVQPIIAFITNIFTTIVTIIGAAFQMVFTVASKIW-----NSIMSTISGIIDGIKAVITGISTTVSSVFNGVKRIITGVFDGIKSAWGGLTDFVGNIFDGVSSAIQTVVDNVKGFVNVVIRGINGAIGLINKIPGVEIGKIPQLISGTTNFQGGFARMNEGGRGEMVVLPSGSQVIPHDATMKYARESARGNKSMLYTSQ-----GADLARVENLLERLLQKNPVIKMDDKV---VAEVVSRNQANSFDQYNYTMGGAAYS------------------------------------------------------------------------------------------- |
| 4BSM Chain:A ((3-1017)) | AIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAWTRVDTQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVITQVKSKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHDQLIEKRLNLRETLMEALHYMLLVSEVEETEIFKICLEYWNHLAAELYRESPFSTSASPHFDVPPRRQLYLPMLFKVRLLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTERIMTEKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLLPNQVWDSILKTNVRACKAVGHPFVIQLGRIYLDMLNVYKCLSENISAAIQANMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAAEVLSTMAIIVNKLHITAEIPQIFDAVFECTLNMINKDEYPEHRTNFFLLLQAVNSHCFPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTNLVEEGKLQEYVANPAFKEHLRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -453663 for 4433 contacts (-102.3/contact) +
2D Compatibility (PS) -61725 + (NN) 18701 + (LL) 0
1D Compatibility (HY) -36800 + (ID) 4150
Total energy: -537637.0 ( -121.28 by residue)
QMean score : 0.202
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