Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVLKSLDSKKLTVIDASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGA--KQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAK--LEVLSP------IEGITDKEQKKGMDYIAYMEQNLQALQKTIK |
| 1TOA Chain:A ((37-312)) | --------------------------------GKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRG-SRLVVAVSETIPVSQRL----------SLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQIGGELFSDAMGDA----GTSEGTYVGMVTHNIDTIVAALA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66948 for 2194 contacts (-30.5/contact) +
2D Compatibility (PS) -28549 + (NN) -10116 + (LL) 3156
1D Compatibility (HY) -19200 + (ID) 3150
Total energy: -124807.0 ( -56.89 by residue)
QMean score : 0.533
|
|
|