Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAS--EHFFYVLKCSDNSYYGGYTTDVLRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAA--FKKLSRKNKDAYLIQREEESE
1S12 Chain:A ((1-94))
MIKVTVTNSFFEVTGHAPDKTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKFEELENCEVKVLAAMVRSLKELEQKFPSQIRVEVIDNGS
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4337 for 579 contacts (-7.5/contact) +
2D Compatibility (PS) -9621 + (NN) -1705 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -17563.0 ( -30.33 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: