Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVIALIPAVM-----WGIMPLVVSKIGGKPRQQIIGTTFGALAFAIGVFIFTNPEYTATIIIASFVSGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLFGVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVGYVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWATGNLALLFSN----------------KLVGIATGFSLSQMGVVISTIG-GILFLGEKKTKKELILVIIGVVLVIIGGTM-IGIAKS |
| 1FWK Chain:A ((1-296)) | MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDK--------EIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSG--LGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALY--NKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211274 for 2337 contacts (-90.4/contact) +
2D Compatibility (PS) -28276 + (NN) -1106 + (LL) 1532
1D Compatibility (HY) 400 + (ID) 1600
Total energy: -240324.0 ( -102.83 by residue)
QMean score : 0.219
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