Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELIAKNVKKMCGNRDMNHLLGVGIAISGLVNRKKGTVIRSTML-GWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGEELKEAYPT--SEL--------NDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHRDLFLTKIDEIASQNFFS-GAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR
3VGL Chain:A ((2-313))----------------------------------------------------------------------------------GLTIGVDIGGTKIAAGVVDEEGRILSTFKVATPP--TAEGIVDAICAAVAGAS---EGHDVEAVGIGAAGYVDDKR-ATVLFAPNIDWRHEPLKDKVEQRV-GLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG---------------


General information:
TITO was launched using:
RESULT:

Template: 3VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -209276 for 2847 contacts (-73.5/contact) +
2D Compatibility (PS) -32937 + (NN) -15298 + (LL) 6964
1D Compatibility (HY) -11200 + (ID) 3450
Total energy: -265197.0 ( -93.15 by residue)
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_3VGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGL-query.scw
PDB file : Tito_Scwrl_3VGL.pdb: