Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNP----------------TNTDV--NTHYWLFKQAEKILAKDVNHMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTYLPGFANAKITGA------------KYFNQSVTDY----------------REGKFDTAFYKLGLAIHYYTDISQPMHANNFTAI-SYPPGYHCAYENYVDTIKHNYQATEDMV---------------AKRFCSDDVKDWLYENAKRAKADYPKIV------NAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLA-------GFLEFWSKKTNE------------------------------- |
| 4EEI Chain:A ((1-433)) | MIKRYDVAEISKIWADENKYAKMLEVELAILEALEDRMVP-KGTAAEIRARAQIRPERVDEIEKVTKHDIIAFCTSIAEQFTAETGKFFHFGVTSSDIIDSALSLQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLGAYVEFKRRLKDLKDFQKDGLTVQFSGAVGNYCILTTEDEKKAADILGLPVEEVSTQVIPRDRIAKLISIHGLIASAIERLAVEIRHLHRSDVFEVYEGFKKNPISTENLTGMARMLRSHVSIALENCVLWHERDISHSSAERFYLPDNFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVESFSKKLQKVMHDEHNIILDIPEMDFEGIKKTYLKEIDHVFDRSVKAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28047 for 2018 contacts (-13.9/contact) +
2D Compatibility (PS) -29635 + (NN) -4002 + (LL) 192
1D Compatibility (HY) -5600 + (ID) 2100
Total energy: -69192.0 ( -34.29 by residue)
QMean score : 0.313
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