Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
1VR4 Chain:A ((1-103))
MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVR--DGMLMVAVSGTAVRI-----
General information:
TITO was launched using:
RESULT:
Template:
1VR4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44213 for 687 contacts (-64.4/contact) +
2D Compatibility (PS) -11301 + (NN) -3627 + (LL) 452
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -72339.0 ( -105.30 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1VR4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VR4-query.scw
PDB file :
Tito_Scwrl_1VR4.pdb
: