Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITFDQLDTELQALENPNTIKIFRNHGCPDSL--DLYGLKIGDLKKIIRREKLTKN---------HELAVKLIESNNSDLIYLG-------LLAINPNKITTEQIEKWNIAFRETWSQLTFGLAS-IVSKRDDALLFAKTWIESDYDLTKS------------------MGWQIYSEHINNLPEAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK------------------------------------------------------- |
| 3C9U Chain:A ((35-342)) | ------FTMRLKELGEFGLIDLIKKTLESKVIGDDTAPVEYCSKKLLLTTDVLNEGVHFLRSYIPEAVGWKAISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEVVGGNISKSEKIGISVFLVGETERFVGRDGARLGDSVFVSGTLGDSRAGLELLLMEKEEYEPFELALIQRHLRPTAR-IDYVKHIQKYANASMDISDGLVADANHLAQRSG-VKIEILSEKLPLSNELKMYCEKYGKNPIEYALFGGEDYQLLFTHPKERWNPFLDMTEIGRVEEGEGVFVDGKKVEPKGWKHF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9298 for 1398 contacts (-6.7/contact) +
2D Compatibility (PS) -23477 + (NN) -7080 + (LL) 756
1D Compatibility (HY) -9200 + (ID) 1400
Total energy: -49699.0 ( -35.55 by residue)
QMean score : 0.232
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