Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGNKLQGKVTGITNFGAFVELEG-GKTGLVHISEVADNYVKDINDILTVGDEVTVKVMNIGDD-G--KIGLSIRKAVDRPDRPEKSYDRKPKYNKKPAGNYVKPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG
2CQO Chain:A ((13-97))
--PALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKD-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34493 for 544 contacts (-63.4/contact) +
2D Compatibility (PS) -8391 + (NN) 489 + (LL) 2528
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -47467.0 ( -87.26 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_2CQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQO-query.scw
PDB file :
Tito_Scwrl_2CQO.pdb
: