Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIV-KGGSERQYSVAAGLERCGTGRVVLVHDGARPFITLDIIDRLLIG-VEQSKAAICAVKVKDTVKRVMNGV-VQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLGTDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
2XWL Chain:A ((2-221))
-ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFG------GEDSVIVSGGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--VTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHH------
General information:
TITO was launched using:
RESULT:
Template:
2XWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141993 for 1789 contacts (-79.4/contact) +
2D Compatibility (PS) -23550 + (NN) -8316 + (LL) 1020
1D Compatibility (HY) -10400 + (ID) 3750
Total energy: -186989.0 ( -104.52 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2XWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XWL-query.scw
PDB file :
Tito_Scwrl_2XWL.pdb
: