Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILLVDGYNVIGAWPELSYLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQFV-RGV-------KR---KS-KKYQVEVVFTHED--------ETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGKKIKRIQEEMPKSNLNLDSDVISQLEKWRRGEE
3V33 Chain:A ((135-245))
-LRPVVIDGSNVAMSHGNKEVF------SCRG-ILL-AVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKI-LVFTPSRRVGGKRVVCYDDRFIVKLAYE-----SDGIVVSNDT----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3V33.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46353 for 639 contacts (-72.5/contact) +
2D Compatibility (PS) -10051 + (NN) -6481 + (LL) 6496
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -60089.0 ( -94.04 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3V33.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V33-query.scw
PDB file :
Tito_Scwrl_3V33.pdb
: