Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ
2KCK Chain:A ((1-112))
MVDQNPE-EYYLEGVLQYDAGNYTESIDLFEKAIQLD--PEESKYWLMKGKALYNLER----YEEAVDCYNYVINVIEDE---YNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KCK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 79736 for 738 contacts (108.0/contact) +
2D Compatibility (PS) -11864 + (NN) -3314 + (LL) 868
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 62476.0 ( 84.66 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_2KCK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KCK-query.scw
PDB file :
Tito_Scwrl_2KCK.pdb
: