Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIVMLTIFTAVLVVGCSGTGTADKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTLNDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNYSKYVTEQVDEFVAQTEIFTNAVKSGDIEKAKAAYVSPRLNYERIEPIAESFGDLDPKIDARINDVENEADWTGFHVIERALWEKKSLEGMDVYADKLLTDAKALQAEVKNLKLE--PKPMVAGAMELLNEAATTKITGEEEAYSHTDLDDLNANVEGSKVVYQAIIPALNAQDKKLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIRDISDQLSHLSELMAQTGKIF |
| 1B5T Chain:A ((1-275)) | GQINVSFEFFP---------------------PRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRT-----GLEAAPHLTCI-----------------------DATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAA------------------------------YPEVHPEAKS----------AQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFAD-------------MTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSRE--GVKDFHFYTLNRAEMSYAICHTLGVRPA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53003 for 2182 contacts (24.3/contact) +
2D Compatibility (PS) -29130 + (NN) -6494 + (LL) 6676
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: 21255.0 ( 9.74 by residue)
QMean score : 0.269
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