Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKKSENQTEKTETKENKGMTRREMLKLSAVAGTGIAVGATGLGTILNVVDQVDKALTPKEKAETGVPFYASNQAGIIT-AQQTYCYIASFDIQTESRQILQDLFVKWT-KFADLTTSGGVLRDVDNDMLPPNDTGEADGLGISNFTVTLGYGPTFFEKDGKDRFGVKAKKPKYL-EKIPH--------MAH--DSLDEA--YSDGDLCIQVCADDQQVAFHGIRNFIRLASGVAVVRWIEEGFLSAPKNETPRNLFGFKDGTANVDHDSNK---------GYKDVVWAEKD-----EPEWMRNGSYLGYRKIQMLIEIWDRS------------SLLDQE-------DTFGRKKASGAPYHKKHEHDKVDPS-------------------KLPADSHVRLAKDT--------KQQMHRRAYSYTNGIDKST-----GTIDAGLLFICFTQNPAKQFLPMLSIMGK-------------M-----------------------DKLNEYTVPIGSAMFACQGGLAPGEIFGEKLL |
| 3VXJ Chain:A ((5-439)) | -------------------------------------------------------------------ILPLNNIQGDILVGMKKQKERFVFFQVND--ATSFKTALKTYVPERITSAAILIS-----------------DPSQQPLAFVNLGFSNTGLQAL-----G---ITDDLGDAQFPDGQFADAANLGDDLSQWVAPFTGTTIHGVFLIGSDQDDFLDQFTDDISSTFGSSITQVQALSGSARPGD-QAGHEHFGFLDGISQPSVTGWETTVFPGQAVVPPGIILTGRDGDTGTRPSWALDGSFMAFRHFQQKVPEFNAYTLANAIPANSAGNLTQQEGAEFLGARMFGRWK-SGAPIDLAPTADDPALGADPQRNNNFDYSDTLTDETRCPFGAHVRKTNPRQDLGGPVDTFHAMRSSIPYGPETSDAELASGVTAQDRGLLFVEYQSIIGNGFRFQQINWANNANFPFSKPITPGIEPIIGQTTPRTVGGLDPLNQNETFTVPLFVIPKGGEYFFLPSISALTAT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74491 for 2554 contacts (-29.2/contact) +
2D Compatibility (PS) -33635 + (NN) -11352 + (LL) 5436
1D Compatibility (HY) -2400 + (ID) 2600
Total energy: -119042.0 ( -46.61 by residue)
QMean score : 0.314
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